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SettingsResearch demo · not for clinical or commercial use
Corollary
  1. Catalog
  2. Simulation
  3. GROMACS

Simulation · GROMACS consortium

GROMACS

The high-performance MD workhorse for large systems and membranes.

Commercial use permittedThe LGPL-2.1 licence allows use in commercial research and products.LGPL-2.1
Availability
Not runnable yet

No backend is configured for this model.

Typical latency
12h
Credits per run
~112,000
Compute tier
D · Simulation

30min–24h

Not runnable yet

This model isn't available to run right now.

Run this model

GROMACS

Needs structure (pdb)

About this model

When the system is a membrane protein in a lipid bilayer with explicit solvent, GROMACS's scaling is what makes the calculation finish. Corollary runs it on multi-GPU nodes with spot-instance scheduling.

Standardized I/O contract

Every model in the Hub speaks the same contract, which is what lets the Router and the agent call any of them without special-casing.

Inputs

  • pdbtextarea · required

    Structure (PDB)

  • nsnumber

    Simulation length (ns)

Outputs

  • trajectorytable

    Analysis over the production run.

Specification

Hardware
4–8× A100/H100
GPU memory
80 GB
Version
2024.2
Licence
LGPL-2.1
Backend
not configured
MCP server
mcp-simulation-server

Tasks

molecular dynamics
mdmembraneshpc