Simulation · Chodera Lab / Stanford
GPU-native molecular dynamics with a scriptable Python API.
30min–24h
Runs on On-demand GPU
Runs on our servers with on-demand compute. A first run needs time to load the model; active capacity can be reused and scales down when idle.Run this model
About this model
OpenMM is the MD engine Corollary reaches for by default: fast on modern GPUs, fully scriptable, and permissively licensed. Used for equilibration before free energy work and for probing conformational stability of designs.
Standardized I/O contract
Every model in the Hub speaks the same contract, which is what lets the Router and the agent call any of them without special-casing.
Inputs
Structure (PDB)
Simulation length (ns)
Force field
Outputs
Frame-by-frame RMSD, radius of gyration and energy.
All-atom coordinates in PDB format, viewable and downloadable.
