Functional Genomics · ginkgo-datapoints
GDPx2
DRUG-seq transcriptomic profiling across four primary human cell types treated with 85 compounds.
What GDPx2 is
GDPx2 is a functional genomics dataset created by ginkgo-datapoints. It provides transcriptomic profiling data generated using DRUG-seq across four primary human cell types treated with 85 individual compounds.
Targeted at researchers in biology and biotechnology, the dataset offers structured measurements of cellular responses to chemical perturbations.
How it was made
The dataset compiles DRUG-seq transcriptomic readouts across four primary human cell types subjected to 85 chemical compounds. The resulting expression and metadata are organised in tabular form and distributed as CSV files.
Key facts
- Category
- Functional Genomics
- Method
- DRUG-seq transcriptomic profiling
- Cell types
- 4 primary human cell types
- Compounds
- 85 compounds
- Format
- CSV
- Release date
- 13 June 2025
What you can use it for
- Compound response profiling
- Investigating how gene expression patterns shift in response to the 85 profiled compounds.
- Cross-cell type expression comparison
- Comparing compound-induced transcriptional changes across the four primary human cell types.
- Transcriptomic model benchmarking
- Evaluating computational and machine learning models on tabular DRUG-seq functional genomics data.
Explore the data
No licence declared
The authors have not published a licence, which means no permission to redistribute the data has been granted to anyone. The rows are not served here; read them on the original dataset page.Strengths and limits
Good at
- Profiles cellular perturbations across four distinct primary human cell backgrounds.
- Provides standardised DRUG-seq transcriptomic data across 85 distinct chemical compounds.
- Delivered in standard tabular CSV format compatible with standard data analysis libraries.
Watch out for
- Screening scope is restricted to 85 specific compounds and four primary human cell types.
Questions
Can I look inside GDPx2 without downloading it?
Not here: it declares no licence, so no permission to redistribute its rows has been granted. Its description and statistics are still shown.
What licence is GDPx2 under?
Its authors have not declared a licence, which means no permission to reuse or redistribute it has been granted.
Which profiling technology does the dataset use?
The dataset uses DRUG-seq transcriptomic profiling to measure cellular gene expression.
How many cell types and compounds are included?
The data covers 85 compounds tested across four primary human cell types.
What file formats are used for the data?
The dataset is delivered as tabular text in CSV format.
Written from GDPx2's own dataset card. Statements citing a figure that does not appear there are removed before publication. Licence and running details come from our registry.