Genomics & Single-Cell · Multi-institution consortium
100M-cell foundation model for pan-tissue annotation and cross-dataset integration.
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5–30min
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About this model
Where scGPT and Geneformer are human-centric, CellFM's training corpus spans tissues and studies broadly enough to annotate atlases it has never seen. Use it when integrating heterogeneous datasets is the hard part.
Standardized I/O contract
Every model in the Hub speaks the same contract, which is what lets the Router and the agent call any of them without special-casing.
Inputs
Expression matrix (h5ad URL)
Outputs
Harmonised cell type labels across datasets.
