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SettingsResearch demo · not for clinical or commercial use
Corollary
  1. Catalog
  2. Genomics & Single-Cell
  3. Nucleotide Transformer v2

Genomics & Single-Cell · InstaDeep / Wellcome Sanger

Nucleotide Transformer v2

DNA foundation model for regulatory elements, promoters and variant scoring.

Academic and non-commercial use onlyThe CC-BY-NC-SA-4.0 licence does not permit commercial use of this model.CC-BY-NC-SA-4.0
Availability
On demand
Typical latency
1.5s
Credits per run
~14
Compute tier
A · Fast

1–30s

Runs on On-demand GPU

Runs on our servers with on-demand compute. A first run needs time to load the model; active capacity can be reused and scales down when idle.

Run this model

Nucleotide Transformer v2

Needs dna sequence

About this model

Trained across 850 genomes, Nucleotide Transformer produces representations that transfer well to promoter classification, enhancer identification and splice site prediction with light fine-tuning.

Standardized I/O contract

Every model in the Hub speaks the same contract, which is what lets the Router and the agent call any of them without special-casing.

Inputs

  • sequencesequence · required

    DNA sequence

Outputs

  • embeddingvector

    Sequence representation for downstream heads.

Specification

Hardware
1× A100 16GB
GPU memory
16 GB
Version
2.0
Licence
CC-BY-NC-SA-4.0
Backend
On demandOn-demand GPU
MCP server
mcp-genomics-server

Tasks

regulatory predictionvariant effect

Source

  • Model card
genomicsregulatoryembedding